species:   Scscl
pid:       PID1672
parent:    Ssc-milR-148
paralog:   
locus:     NW_001820829.1:929974-930068
matures:   ['UAUCGAAUGCUAGUAUUGGAUA', 'GAAUGGUUAAAGCAUUUCGAUAAA']
srr:       SRR12527899
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527899.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527899.cram NW_001820829.1:929974-930068

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

          **************************                         ************************          
GAGACAGGCCUAGAAUGGUUAAAGCAUUUCGAUAAACAUACUAUUCGUCAAAAGAAGAGCAAAUAUCGAAUGCUAGUAUUGGAUAGGCAUGAAAG
....((.(((((...((((...((((((.(((((......((.(((.......))).))....)))))))))))...))))..))))).))....
---------------------------------------------------------------UAUCGAAUGCUAGUAUUGGAUA---------- l=22 a=0 c
------------GAAUGGUUAAAGCAUUUCGAUAAA----------------------------------------------------------- l=24 a=0 c*
---------------------------------------------------------------UAUCGAAUGCUAGUAUUGGAUA---------- l=22 a=0 ma
------------GAAUGGUUAAAGCAUUUCGAUAAA----------------------------------------------------------- l=24 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-000110001100
fn-001
